PUBLICATIONS
17. Y. Shin, Y.-C. Chang, D. S. W. Lee, J. Berry, D. W. Sanders, P. Ronceray, N. S. Wingreen, M. P. Haataja and C. P. Brangwynne. “Liquid Nuclear Condensates Mechanically Sense and Restructure the Genome”, Cell 175, 1481-1491 (2018). [PDF]
16. J. Berry, S. Zhou, J. Han, D. J. Srolovitz, and M. P. Haataja. “Domain Morphology and Mechanics of the H/T' Transition Metal Dichalcogenide Monolayers”, Physical Review Materials 2, 114002 (2018). [PDF]
15. J. Berry, C. P. Brangwynne, and M. P. Haataja. “Physical Principles of Intracellular Organization via Active and Passive Phase Transitions”, Invited review article, Reports on Progress in Physics 81 (4), 046601 (2018). [PDF]
14. C. H. Naylor, W. M. Parkin, Z. Gao, J. Berry, S. Zhou, Q. Zhang, B. McClimon, L. Z. Tan, C. E. Kehayias, M. Zhao, R. S. Gona, R. W. Carpick, A. Rappe, D. J. Srolovitz, M. Drndic, and A. T. C. Johnson. “Synthesis and Physical Properties of Phase-Engineered Transition Metal Dichalcogenide Monolayer Heterostructures”, ACS Nano, 11 (9), 8619 (2017). [PDF]
13. J. Berry, S. Zhou, J. Han, D. J. Srolovitz, and M. P. Haataja. “Dynamic Phase Engineering of Bendable Transition Metal Dichalcogenide Monolayers”, Nano Letters 17 (4), 2473 (2017). [PDF]
12. Y. Shin, J. Berry, N. Palucci, M. P. Haataja, J. E. Toettcher, and C. P. Brangwynne. “Spatiotemporal Control of Intracellular Phase Transitions Using Light-Activated optoDroplets”, Cell 168, 1-13 (2017). [PDF]
11. J. Berry*, S. C. Weber*, N. Vaidya, M. P. Haataja, and C. P. Brangwynne. “RNA Transcription Modulates Phase Transition-Driven Nuclear Body Assembly”, Proceedings of the National Academy of Sciences 112 (38), E5237-E5245 (2015). *Co-first authors. [PDF]
10. J. Berry, J. Rottler, N. Provatas, and C. W. Sinclair. “An Atomistic Study of Diffusion-Mediated Plasticity and Creep Using Phase Field Crystal Methods”, Physical Review B 92, 134103 (2015). [PDF]
9. J. Berry, N. Provatas, J. Rottler, and C. W. Sinclair. “Phase Field Crystal Modeling as a Unified Atomistic Approach to Defect Dynamics”, Physical Review B 89, 214117 (2014). [PDF]
8. J. Berry and M. Grant. “Phase-Field Crystal Modeling of Glass-Forming Liquids: Spanning Time Scales During Vitrification, Aging, and Deformation”, Physical Review E 89, 062303 (2014). [PDF]
7. J. Berry, N. Provatas, J. Rottler, and C. W. Sinclair. “Defect Stability in Phase-Field Crystal Models: Stacking Faults and Partial Dislocations”, Physical Review B 86, 224112 (2012). Selected as an Editor’s Suggestion. [PDF]
6. J. Berry and M. Grant. “Modeling Multiple Time Scales During Glass Formation with Phase-Field Crystals”, Physical Review Letters 106, 175702 (2011). [PDF]
5. J. Berry, K. R. Elder, and M. Grant. “Melting at Dislocations and Grain Boundaries: A Phase-Field Crystal Study”, Physical Review B 77, 224114 (2008). Selected as an Editor’s Suggestion. [PDF]
4. J. Berry, K. R. Elder, and M. Grant. “Simulation of an Atomistic Dynamic Field Theory for Monatomic Liquids: Freezing and Glass Formation”, Physical Review E 77, 061506 (2008). [PDF]
3. K. R. Elder, N. Provatas, J. Berry, P. Stefanovic, and M. Grant. “Phase-field Crystal Modeling and Classical Density Functional Theory of Freezing”, Physical Review B 75, 064107 (2007). [PDF]
2. J. Berry, M. Grant, and K. R. Elder. “Diffusive Atomistic Dynamics of Edge Dislocations in Two Dimensions”, Physical Review E 73, 031609 (2006). [PDF]
1. K. R. Elder, J. Berry, and N. Provatas. “Modeling Solidification, Elasticity, and Structural Stability Using Phase-Field Crystals”, TMS Letters 3, 41-42 (2004).